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How biotechs use software to make drugs
The realistic use of data infrastructure to develop a PCSK9 binding antibody from ideation to IND
Oct 30, 2024
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Kenny Workman
14
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How biotechs use software to make drugs
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Benchmarking popV Ensemble Cell Type Annotations on CS Genetics PBMC Data
How well do ML tools actually perform when annotating hundreds of CS Genetics PBMC samples?
Apr 11
•
Zhen Yang
22
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Benchmarking popV Ensemble Cell Type Annotations on CS Genetics PBMC Data
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Landscape of Spatial Proteomics: Part III
A review of sequencing-based spatial proteomics assays: the history, technology tree, 11 companies + 14 products.
Mar 27
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Hannah Le
22
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Landscape of Spatial Proteomics: Part III
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Landscape of Imaging-based Spatial RNA Technology: Part II
A review of imaging-based spatial transcriptional assays: the history, technology tree, 9 companies + 9 products
Mar 6
•
Hannah Le
8
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Landscape of Imaging-based Spatial RNA Technology: Part II
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Landscape of Sequencing-based Spatial RNA Technology: Part I
A review of sequencing-based spatial transcriptional assays: the history, technology tree, 6 companies + 14 products.
Feb 27
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Hannah Le
20
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Landscape of Sequencing-based Spatial RNA Technology: Part I
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The Open Source Stack for Biological Imaging
A speedrun through scientific imaging tools, what each of them do, concrete scientific use cases and infrastructure principles.
Jan 29
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Kenny Workman
11
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The Open Source Stack for Biological Imaging
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GPU peak calling for epigenetics
A deep dive on an important algorithm for ATAC/ChIP-seq analysis // an accelerated implementation with ~15x speed improvements
Jan 21
•
Kenny Workman
,
Harihara Muralidharan
, and
Brontë Kolar
7
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GPU peak calling for epigenetics
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How does arthritis actually work?
The immunology of rheumatoid arthritis. Tracing an experimental campaign, looking at current treatments and exploring mechanisms for new drugs.
Jan 20
•
Kenny Workman
9
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How does arthritis actually work?
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